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Dec 2017

Gaimster H., Alston M., Richardson D., Gates A., Rowley G.

Transcriptional and Environmental Control of Bacterial Denitrification and N2O Emissions.

FEMS Microbiology Letters

Publishers version: doi:10.1093/femsle/fnx277

Nov 2017

Bastkowski S., Mapleson D., Spillner A., Wu T., Balvočiūtė M., Moulton V.

SPECTRE: a Suite of PhylogEnetiC Tools for Reticulate Evolution

Bioinformatics

Publishers version: doi:10.1093/bioinformatics/btx740

Nov 2017

Bueno-Sancho V., Persoons A., Hubbard A., Cabrera-Quio L. E., Lewis C. M., Corredor-Moreno P., Bunting D. C. E., Ali S., Chng S., Hodson D. P., Madariaga-Burrows R., Bryson R., Thomas J., Holdgate S., Saunders D. G. O.

Pathogenomic analysis of wheat yellow rust lineages detects seasonal variation and host specificity

Genome Biology and Evolution

Publishers version: doi:10.1093/gbe/evx241

Nov 2017

Heman-Ackah S. M., Manzano R., Hoozemans J. J. M., Scheper W., Flynn R., Haerty W., Cowley S. A., Bassett A. R., Wood M. J. A.

Alpha-synuclein induces the unfolded protein response in Parkinson's disease SNCA triplication iPSC-derived neurons

Hum Mol Genet

Publishers version: doi:10.1093/hmg/ddx331

Nov 2017

Sierocinski P., Milferstedt K., Bayer F., Grosskopf T., Alston M., Bastkowski S., Swarbreck D., Hobbs P., Soyer O. S., Hamelin J., Buckling A.

A Single Community Dominates Structure and Function of a Mixture of Multiple Methanogenic Communities.

Current Biology

Publishers version: doi:10.1016/j.cub.2017.09.056

Nov 2017

Zimin A. V., Puiu D., Hall R., Kingan S., Clavijo B., Salzberg S. L.

The first near-complete assembly of the hexaploid bread wheat genome, Triticum aestivum.

GigaScience

Publishers version: doi:10.1093/gigascience/gix097

Nov 2017

Wintle B. C., Boehm C. R., Rhodes C., Molloy J. C., Millett P., Adam L., Breitling R., Carlson R., Casagrande R., Dando M., Doubleday R., Drexler E., Edwards B., Ellis T., Evans N. G., Hammond R., Haseloff J., Kahl L., Kuiken T., Lichman B. R., Matthewman C. A., Napier J. A., ÓhÉigeartaigh S. S., Patron N., Perello E., Shapira P., Tait J., Takano E., Sutherland W. J.

A transatlantic perspective on 20 emerging issues in biological engineering.

eLife

Publishers version: doi:10.7554/eLife.30247

Oct 2017

Metris A., Sudhakar P., Fazekas D., Demeter A., Eszter A., Olbei M., Branchu P., Kingsley R., Baranyi J., Korcsmaros T.

SalmoNet, an integrated network of ten Salmonella enterica strains reveals common and distinct pathways to host adaptation

Nature Partner Journals Systems Biology and Applications

Publishers version: doi:doi:10.1038/s41540-017-0034-z

Oct 2017

Paajanen P., Strauss J., van Oosterhout C., McMullan M., Clark M. D., Mock T.

Building a locally diploid genome and transcriptome of the diatom Fragilariopsis cylindrus.

Scientific data

Publishers version: doi:10.1038/sdata.2017.149

Oct 2017

Duncan S., Rosa S.

Gaining insight into plant gene transcription using smFISH.

Transcription

Publishers version: doi:10.1080/21541264.2017.1372043

Oct 2017

Lamprinaki D., Beasy G., Zhekova A., Wittmann A., James S., Dicks J., Iwakura Y., Saijo S., Wang X., Chow C. W., Roberts I., Korcsmaros T., Mayer U., Wileman T., Kawasaki N.

LC3-Associated Phagocytosis Is Required for Dendritic Cell Inflammatory Cytokine Response to Gut Commensal Yeast Saccharomyces cerevisiae.

Frontiers in immunology

Publishers version: doi:10.3389/fimmu.2017.01397

Oct 2017

Wong E. S., Schmitt B. M., Kazachenka A., Thybert D., Redmond A., Connor F., Rayner T. F., Feig C., Ferguson-Smith A. C., Marioni J. C., Odom D. T., Flicek P.

Interplay of cis and trans mechanisms driving transcription factor binding and gene expression evolution.

Nature communications

Publishers version: doi:10.1038/s41467-017-01037-x

Sep 2017

White B. H., Kamoun S., Haerty W.

Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination.

BMC Biology

Publishers version: doi:10.1186/s12915-017-0419-x

Sep 2017

Rowe S. F., Le Gall G., Ainsworth E. V., Davies J. A., Lockwood C. W. J., Shi L., Elliston A., Roberts I. N., Waldron K. W., Richardson D. J., Clarke T. A., Jeuken L. J. C., Reisner E., Butt J. N.

Light-Driven H2 Evolution and C=TC or C=TO Bond Hydrogenation by Shewanella oneidensis: A Versatile Strategy for Photocatalysis by Nonphotosynthetic Microorganisms

ACS Catalysis

Publishers version: doi:10.1021/acscatal.7b02736

Sep 2017

Tamiru M., Natsume S., Takagi H., White B., Yaegashi H., Shimizu M., Yoshida K., Uemura A., Oikawa K., Abe A., Urasaki N., Matsumura H., Babil P., Yamanaka S., Matsumoto R., Muranaka S., Girma G., Lopez-Montes A., Gedil M., Bhattacharjee R., Abberton M., Kumar P. L., Rabbi I., Tsujimura M., Terachi T., Haerty W., Corpas M., Kamoun S., Kahl G., Takagi H., Asiedu R., Terauchi R. ..

Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination.

BMC Biology

Publishers version: doi:10.1186/s12915-017-0419-x