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Apr 2018

Mathers T. C., Mugford S., Percival-Alwyn L., Chen Y., Kaithakottil G., Swarbreck D., Hogenhout S. A., van Oosterhout C.

Sex-specific changes in the aphid DNA methylation landscape

https://www.biorxiv.org/content/early/2018/04/19/286302

Publishers version: doi:10.1101/286302

Apr 2018

Mincarelli L., Lister A., Lipscombe J., Macaulay I. C.

Defining Cell Identity with Single Cell Omics.

Proteomics

Publishers version: doi:10.1002/pmic.201700312

Apr 2018

Hall N.

A modified sequence capture approach allowing standard and methylation analyses of the same enriched genomic DNA sample

BMC Genomics

Publishers version: doi:10.1186/s12864-018-4640-y

Apr 2018

Hall N.

Genomics of habitat choice and adaptive evolution in a deep-sea fish

Nat Ecol Evol

Publishers version: doi:10.1038/s41559-018-0482-x

Apr 2018

McMullan M., Rafiqi M., Kaithakottil G., Clavijo B. J., Bilham L., Orton E., Percival-Alwyn L., Ward B. J., Edwards A., Saunders D. G. O., Garcia Accinelli G., Wright J., Verweij W., Koutsovoulos G., Yoshida K., Hosoya T., Williamson L., Jennings P., Ioos R., Husson C., Hietala A. M., Vivian-Smith A., Solheim H., MaClean D., Fosker C., Hall N., Brown J. K. M., Swarbreck D., Blaxter M., Downie J. A., Clark M. D.

The ash dieback invasion of Europe was founded by two genetically divergent individuals.

Nature ecology & evolution

Publishers version: doi:10.1038/s41559-018-0548-9

Mar 2018

Palkopoulou E., Lipson M., Mallick S., Nielsen S., Rohland N., Baleka S., Karpinski E., Ivancevic A. M., To T. H., Kortschak R. D., Raison J. M., Qu Z., Chin T. J., Alt K. W., Claesson S., Dalén L., MacPhee R. D. E., Meller H., Roca A. L., Ryder O. A., Heiman D., Young S., Breen M., Williams C., Aken B. L., Ruffier M., Karlsson E., Johnson J., Di Palma F., Alfoldi J., Adelson D. L., Mailund T., Munch K., Lindblad-Toh K., Hofreiter M., Poinar H., Reich D.

A comprehensive genomic history of extinct and living elephants.

Proceedings of the National Academy of Sciences of the United States of America

Publishers version: doi:10.1073/pnas.1720554115

Mar 2018

Vazquez-Vilar M., Orzaez D., Patron N. J.

DNA assembly standards: Setting the low-level programming code for plant biotechnology

Plant Science

Publishers version: doi:10.1016/j.plantsci.2018.02.024

Feb 2018

Modha S., Thanki A., Cotmore S. F., Davidson A., Hughes J.

ViCTree: An automated framework for taxonomic classification from protein sequences

Bioinformatics

Publishers version: doi:10.1093/bioinformatics/bty099

Feb 2018

Thanki A. S., Soranzo N., Haerty W., Davey R. P.

GeneSeqToFamily: a Galaxy workflow to find gene families based on the Ensembl Compara GeneTrees Pipeline.

GigaScience

Publishers version: doi:10.1093/gigascience/giy005

Feb 2018

Kuhaudomlarp S., Patron N. J., Henrissat B., Rejzek M., Saalbach G., Field R. A.

Identification ofEuglena gracilisß-1,3-glucan phosphorylase and establishment of a new glycoside hydrolase (GH) family GH149.

Journal of Biological Chemistry

Publishers version: doi:10.1074/jbc.RA117.000936

Jan 2018

Halewood M., Chiurugwi T., Sackville Hamilton R., Kurtz B., Marden E., Welch E., Michiels F., Mozafari J., Sabran M., Patron N., Kersey P., Bastow R., Dorius S., Dias S., McCouch S., Powell W.

Plant genetic resources for food and agriculture: opportunities and challenges emerging from the science and information technology revolution.

New Phytologist

Publishers version: doi:10.1111/nph.14993

Jan 2018

Ward N. J., Green D., Higgins J., Dalmay T., Münsterberg A., Moxon S., Wheeler G. N.

microRNAs associated with early neural crest development in Xenopus laevis.

BMC Genomics

Publishers version: doi:10.1186/s12864-018-4436-0

Jan 2018

Watson A., Ghosh S., Williams M. J., Cuddy W. S., Simmonds J., Rey M. -. D., Hatta M. A. M., Hinchliffe A., Steed A., Reynolds D., Adamski N. M., Breakspear A., Korolev A., Rayner T., Dixon L. E., Riaz A., Martin W., Ryan M., Edwards D., Batley J., Raman H., Carter J., Rogers C., Domoney C., Moore G., Harwood W., Nicholson P., Dieters M. J., DeLacy I. H., Zhou J., Uauy C., Boden S. A., Park R. F., Wulff B. B. H., Hickey L. T.

Speed breeding is a powerful tool to accelerate crop research and breeding

Nature Plants

Publishers version: doi:10.1038/s41477-017-0083-8

Jan 2018

Hall N.

Comparative genomic analysis of the 'pseudofungus' hyphochytrium catenoides

Open Biol

Publishers version: doi:10.1098/rsob.170184

Dec 2017

Zhou J., Applegate C., Alonso A., Reynolds D., Orford S., Mackiewicz M., Griffiths S., Penfield S., Pullen N.

Leaf-GP: an open and automated software application for measuring growth phenotypes for arabidopsis and wheat

Plant Methods

Publishers version: doi:10.1186/s13007-017-0266-3