Publications.

Jun 2016

Wilkinson P. A., Winfield M. O., Barker G. L., Tyrrell S., Bian X., Allen A. M., Burridge A., Coghill J. A., Waterfall C., Caccamo M., Davey R. P., Edwards K. J.

CerealsDB 3.0: expansion of resources and data integration.

BMC Bioinformatics

Publishers version: doi:10.1186/s12859-016-1139-x

Jun 2016

Großkopf T., Zenobi S., Alston M., Folkes L., Swarbreck D., Soyer O. S.

A stable genetic polymorphism underpinning microbial syntrophy.

The ISME journal

Publishers version: doi:10.1038/ismej.2016.80

Jun 2016

van't Hof A. E., Campagne P., Rigden D. J., Yung C. J., Lingley J., Quail M. A., Hall N., Darby A. C., Saccheri I. J.

The industrial melanism mutation in British peppered moths is a transposable element

Nature

Publishers version: doi:10.1038/nature17951

Jun 2016

Patron N.

Blueprints for green biotech: development and application of standards for plant synthetic biology.

Biochemical Society Transactions

Publishers version: doi:10.1042/BST20160044

May 2016

Yoshida K., Saunders D. G. O., Mitsuoka C., Natsume S., Kosugi S., Saitoh H., Inoue Y., Chuma I., Tosa Y., Cano L., Kamoun S., Terauchi R.

Host specialization of the blast fungus Magnaporthe oryzae is associated with dynamic gain and loss of genes linked to transposable elements

BMC Genomics

Publishers version: doi:10.1186/s12864-016-2690-6

May 2016

Afgan E., Baker D., van den Beek M., Blankenberg D., Bouvier D., ČEch M., Chilton J., Clements D., Coraor N., Eberhard C., Grüning B., Guerler A., Hillman-Jackson J., Von Kuster G., Rasche E., Soranzo N., Turaga N., Taylor J., Nekrutenko A., Goecks J.

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update.

Nucleic Acids Research

Publishers version: doi:10.1093/nar/gkw343

Apr 2016

Witek K., Jupe F., Witek A. I., Baker D., Clark M. D., Jones J. D. G.

Accelerated cloning of a potato late blight–resistance gene using RenSeq and SMRT sequencing.

Nature Biotechnology

Publishers version: doi:doi:10.1038/nbt.3540

Apr 2016

Hall A. E., Lu W. T., Godfrey J. D., Antonov A. V., Paicu C., Moxon S., Dalmay T., Wilczynska A., Muller P. A. J., Bushell M.

The cytoskeleton adaptor protein ankyrin-1 is upregulated by p53 following DNA damage and alters cell migration

Cell Death and Disease

Publishers version: doi:10.1038/cddis.2016.91

Apr 2016

Braasch I., Gehrke A. R., Smith J. J., Kawasaki K., Manousaki T., Pasquier J., Amores A., Desvignes T., Batzel P., Catchen J., Berlin A. M., Campbell M. S., Barrell D., Martin K. J., Mulley J. F., Ravi V., Lee A. P., Nakamura T., Chalopin D., Fan S., Wcisel D., Cañestro C., Sydes J., Beaudry F. E., Sun Y., Hertel J., Beam M. J., Fasold M., Ishiyama M., Johnson J., Kehr S., Lara M., Letaw J. H., Litman G. W., Litman R. T., Mikami M., Ota T., Saha N. R., Williams L., Stadler P. F., Wang H., Taylor J. S., Fontenot Q., Ferrara A., Searle S. M., Aken B., Yandell M., Schneider I., Yoder J. A., Volff J. N., Meyer A., Amemiya C. T., Venkatesh B., Holland P. W., Guiguen Y., Bobe J., Shubin N. H., Di Palma F., Alföldi J., Lindblad-Toh K., Postlethwait J. H.

The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons.

Nature Genetics

Publishers version: doi:10.1038/ng.3526

Apr 2016

Csályi K., Fazekas D., Kadlecsik T., Türei D., Gul L., Horváth B., Módos D., Demeter A., Pápai N., Lenti K., Csermely P., Vellai T., Korcsmaros T., Varga M.

SignaFish: A Zebrafish-Specific Signaling Pathway Resource.

Zebrafish

Publishers version: doi:10.1089/zeb.2016.1277

Mar 2016

Giusti J., Pinhal D., Moxon S., Campos C. L., Münsterberg A., Martins C.

MicroRNA-10 modulates Hox genes expression during Nile tilapia embryonic development.

Mechanisms of Development

Publishers version: doi:10.1016/j.mod.2016.03.002

Feb 2016

Patron N. J.

Synthetic Plants

Publishers version: doi:

Feb 2016

Petre B., Saunders D. G., Sklenar J., Lorrain C., Krasileva K. V., Win J., Duplessis S., Kamoun S.

Heterologous Expression Screens in Nicotiana benthamiana Identify a Candidate Effector of the Wheat Yellow Rust Pathogen that Associates with Processing Bodies.

PLoS ONE

Publishers version: doi:10.1371/journal.pone.0149035

Feb 2016

Verbrugghe E., Dhaenens M., Leyman B., Boyen F., Shearer N., Van Parys A., Bert W., Favoreel H., Deforce D., Thompson A., Haesebrouck F., Pasmans F.

Host Stress Drives Salmonella Recrudescence.

Nature Scientific Reports

Publishers version: doi:10.1038/srep20849

Feb 2016

Vihinen M., Hancock J. M., Maglott D. R., Landrum M. J., Schaafsma G. C., Taschner P.

Human Variome Project Quality Assessment Criteria for Variation Databases.

Human Mutation

Publishers version: doi:10.1002/humu.22976