Publications

Subscribe.

Get the latest science, news, events, training courses and vacancies by email.

access level
Feb 2010
Alston MJ, Seers J, Hinton JC, Lucchini S

BABAR: an R package to simplify the normalisation of common reference design microarray-based transcriptomic datasets

Journal Article
Publishers version: doi: 10.1186/1471-2105-11-73
access level
Feb 2010
Steward CA, Humphray S, Plumb B, Jones MC, Quail MA, Rice S, Cox T, Davies R, Bonfield J, Keane TM, Nefedov M, de Jong PJ, Lyons P, Wicker L, Todd J, Hayashizaki Y, Gulban O, Danska J, Harrow J, Hubbard T, Rogers J, Adams DJ

Genome-wide end-sequenced BAC resources for the NOD/MrkTac☆ and NOD/ShiLtJ☆☆ mouse genomes

Journal Article
Publishers version: doi: 10.1016/j.ygeno.2009.10.004
Feb 2010
The International Brachypodium Initiative

Genome sequencing and analysis of the model grass Brachypodium distachyon

Journal Article
Publishers version: doi: 10.1038/nature08747
Jan 2010
Kool J, Uren AG, Martins CP, Sie D, de Ridder J, Turner G, van Uitert M, Matentzoglu K, Lagcher W, Krimpenfort P, Gadiot J, Pritchard C, Lenz J, Lund AH, Jonkers J, Rogers J, Adams DJ, Wessels L, Berns A, van Lohuizen M

Insertional Mutagenesis in Mice Deficient for p15Ink4b, p16Ink4a, p21Cip1, and p27Kip1 Reveals Cancer Gene Interactions and Correlations with Tumor Phenotypes

Journal Article
Publishers version: doi: 10.1158/0008-5472.CAN-09-2736
Jan 2010
Brown NJ, Palmer BG, Stanley S, Hajaji H, Janacek SH, Astley HM, Parsley K, Kajala K, Quick WP, Trenkamp S, Fernie AR, Maurino VG, Hibberd JM

C4acid decarboxylases required for C4photosynthesis are active in the mid-vein of the C3speciesArabidopsis thaliana, and are important in sugar and amino acid metabolism

Journal Article
Publishers version: doi: 10.1111/j.1365-313X.2009.04040.x
access level
Jan 2010
Archibald AL, Bolund L, Churcher C, Fredholm M, Groenen MAM, Harlizius B, Lee K, Milan D, Rogers J, Rothschild MF, Uenishi H, Wang J, Schook LB, Genome Sequencing Consortium S

Pig genome sequence - analysis and publication strategy

Journal Article
Publishers version: doi: 10.1186/1471-2164-11-438
access level
Jan 2010
Garvin DF, McKenzie N, Vogel JP, Mockler TC, Blankenheim ZJ, Wright J, Cheema JJ, Dicks J, Huo N, Hayden DM, Gu Y, Tobias C, Chang JH, Chu A, Trick M, Michael TP, Bevan MW, Snape JW

An SSR-based genetic linkage map of the model grassBrachypodium distachyon

Journal Article
Publishers version: doi: 10.1139/G09-079
access level
Dec 2009
Febrer M, Wilhelm E, Al-Kaff N, Wright J, Powell W, Bevan MW, Boulton MI

Rapid identification of the three homoeologues of the wheat dwarfing geneRhtusing a novel PCR-based screen of three-dimensional BAC pools

Journal Article
Publishers version: doi: 10.1139/G09-073
access level
Oct 2009
Schriml LM, Arze C, Nadendla S, Ganapathy A, Felix V, Mahurkar A, Phillippy K, Gussman A, Angiuoli S, Ghedin E, White O, Hall N

GeMInA, Genomic Metadata for Infectious Agents, a geospatial surveillance pathogen database

Journal Article
Publishers version: doi: 10.1093/nar/gkp832
access level
Sep 2009
BOUZID M, HEAVENS D, ELWIN K, CHALMERS RM, HADFIELD SJ, HUNTER PR, TYLER KM

Whole genome amplification (WGA) for archiving and genotyping of clinical isolates ofCryptosporidiumspecies

Journal Article
Publishers version: doi: 10.1017/S0031182009991132
access level
Aug 2009
Quince C, Lanzén A, Curtis TP, Davenport RJ, Hall N, Head IM, Read LF, Sloan WT

Accurate determination of microbial diversity from 454 pyrosequencing data

Journal Article
Publishers version: doi: 10.1038/nmeth.1361
access level
Jun 2009
Janacek SH, Trenkamp S, Palmer B, Brown NJ, Parsley K, Stanley S, Astley HM, Rolfe SA, Paul Quick W, Fernie AR, Hibberd JM

Photosynthesis in cells around veins of the C3 plant Arabidopsis thaliana is important for both the shikimate pathway and leaf senescence as well as contributing to plant fitness

Journal Article
Publishers version: doi: 10.1111/j.1365-313X.2009.03873.x
access level
May 2009
Bontell IL, Hall N, Ashelford KE, Dubey J, Boyle JP, Lindh J, Smith JE

Whole genome sequencing of a natural recombinant Toxoplasma gondiistrain reveals chromosome sorting and local allelic variants

Journal Article
Publishers version: doi: 10.1186/gb-2009-10-5-r53
access level
May 2009
Trick M, Cheung F, Drou N, Fraser F, Lobenhofer EK, Hurban P, Magusin A, Town CD, Bancroft I

A newly-developed community microarray resource for transcriptome profiling in Brassica species enables the confirmation of Brassica-specific expressed sequences

Journal Article
Publishers version: doi: 10.1186/1471-2229-9-50
access level
Feb 2009
Liti G, Carter DM, Moses AM, Warringer J, Parts L, James SA, Davey RP, Roberts IN, Burt A, Koufopanou V, Tsai IJ, Bergman CM, Bensasson D, O’Kelly MJT, van Oudenaarden A, Barton DBH, Bailes E, Nguyen AN, Jones M, Quail MA, Goodhead I, Sims S, Smith F, Blomberg A, Durbin R, Louis EJ

Population genomics of domestic and wild yeasts

Journal Article
Publishers version: doi: 10.1038/nature07743