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access level
Nov 2017
Thompson LR, Sanders JG, McDonald D, Amir A, Ladau J, Locey KJ, Prill RJ, Tripathi A, Gibbons SM, Ackermann G, Navas-Molina JA, Janssen S, Kopylova E, Vázquez-Baeza Y, González A, Morton JT, Mirarab S, Zech Xu Z, Jiang L, Haroon MF, Kanbar J, Zhu Q, Jin Song S, Kosciolek T, Bokulich NA, Lefler J, Brislawn CJ, Humphrey G, Owens SM, Hampton-Marcell J, Berg-Lyons D, McKenzie V, Fierer N, Fuhrman JA, Clauset A, Stevens RL, Shade A, Pollard KS, Goodwin KD, Jansson JK, Gilbert JA, Knight R, The Earth Microbiome Project Consortium, Rivera JLA, Al-Moosawi L, Alverdy J, Amato KR, Andras J, Angenent LT, Antonopoulos DA, Apprill A, Armitage D, Ballantine K, Bárta J, Baum JK, Berry A, Bhatnagar A, Bhatnagar M, Biddle JF, Bittner L, Boldgiv B, Bottos E, Boyer DM, Braun J, Brazelton W, Brearley FQ, Campbell AH, Caporaso JG, Cardona C, Carroll J, Cary SC, Casper BB, Charles TC, Chu H, Claar DC, Clark RG, Clayton JB, Clemente JC, Cochran A, Coleman ML, Collins G, Colwell RR, Contreras M, Crary BB, Creer S, Cristol DA, Crump BC, Cui D, Daly SE, Davalos L, Dawson RD, Defazio J, Delsuc F, Dionisi HM, Dominguez-Bello MG, Dowell R, Dubinsky EA, Dunn PO, Ercolini D, Espinoza RE, Ezenwa V, Fenner N, Findlay HS, Fleming ID, Fogliano V, Forsman A, Freeman C, Friedman ES, Galindo G, Garcia L, Garcia-Amado MA, Garshelis D, Gasser RB, Gerdts G, Gibson MK, Gifford I, Gill RT, Giray T, Gittel A, Golyshin P, Gong D, Grossart H, Guyton K, Haig S, Hale V, Hall RS, Hallam SJ, Handley KM, Hasan NA, Haydon SR, Hickman JE, Hidalgo G, Hofmockel KS, Hooker J, Hulth S, Hultman J, Hyde E, Ibáñez-Álamo JD, Jastrow JD, Jex AR, Johnson LS, Johnston ER, Joseph S, Jurburg SD, Jurelevicius D, Karlsson A, Karlsson R, Kauppinen S, Kellogg CTE, Kennedy SJ, Kerkhof LJ, King GM, Kling GW, Koehler AV, Krezalek M, Kueneman J, Lamendella R, Landon EM, Lane-deGraaf K, LaRoche J, Larsen P, Laverock B, Lax S, Lentino M, Levin II, Liancourt P, Liang W, Linz AM, Lipson DA, Liu Y, Lladser ME, Lozada M, Spirito CM, MacCormack WP, MacRae-Crerar A, Magris M, Martín-Platero AM, Martín-Vivaldi M, Martínez LM, Martínez-Bueno M, Marzinelli EM, Mason OU, Mayer GD, McDevitt-Irwin JM, McDonald JE, McGuire KL, McMahon KD, McMinds R, Medina M, Mendelson JR, Metcalf JL, Meyer F, Michelangeli F, Miller K, Mills DA, Minich J, Mocali S, Moitinho-Silva L, Moore A, Morgan-Kiss RM, Munroe P, Myrold D, Neufeld JD, Ni Y, Nicol GW, Nielsen S, Nissimov JI, Niu K, Nolan MJ, Noyce K, O’Brien SL, Okamoto N, Orlando L, Castellano YO, Osuolale O, Oswald W, Parnell J, Peralta-Sánchez JM, Petraitis P, Pfister C, Pilon-Smits E, Piombino P, Pointing SB, Pollock FJ, Potter C, Prithiviraj B, Quince C, Rani A, Ranjan R, Rao S, Rees AP, Richardson M, Riebesell U, Robinson C, Rockne KJ, Rodriguezl SM, Rohwer F, Roundstone W, Safran RJ, Sangwan N, Sanz V, Schrenk M, Schrenzel MD, Scott NM, Seger RL, Seguin-Orlando A, Seldin L, Seyler LM, Shakhsheer B, Sheets GM, Shen C, Shi Y, Shin H, Shogan BD, Shutler D, Siegel J, Simmons S, Sjöling S, Smith DP, Soler JJ, Sperling M, Steinberg PD, Stephens B, Stevens MA, Taghavi S, Tai V, Tait K, Tan CL, Tas¸ N, Taylor DL, Thomas T, Timling I, Turner BL, Urich T, Ursell LK, van der Lelie D, Van Treuren W, van Zwieten L, Vargas-Robles D, Thurber RV, Vitaglione P, Walker DA, Walters WA, Wang S, Wang T, Weaver T, Webster NS, Wehrle B, Weisenhorn P, Weiss S, Werner JJ, West K, Whitehead A, Whitehead SR, Whittingham LA, Willerslev E, Williams AE, Wood SA, Woodhams DC, Yang Y, Zaneveld J, Zarraonaindia I, Zhang Q, Zhao H

A communal catalogue reveals Earth’s multiscale microbial diversity

Journal Article
Publishers version: doi: 10.1038/nature24621
access level
Oct 2017
Grüning B, Dale R, Sjödin A, Chapman BA, Rowe J, Tomkins-Tinch CH, Valieris R, Caprez A, Batut B, Haudgaard M, Cokelaer T, Beauchamp KA, Pedersen BS, Hoogstrate Y, Bretaudeau A, Ryan D, Corguillé GL, Yusuf D, Luna-Valero S, Kirchner R, Brinda K, Wollmann T, Raden M, Heeringen SJv, Soranzo N, Pantano L, Charlop-Powers Z, Unneberg P, Smet MD, Martin M, Kuster GV, Antao T, Miladi M, Thornton K, Brueffer C, Beek Mvd, Maticzka D, Blank C, Will S, Gravouil K, Wolff J, Holtgrewe M, Fallmann J, Piro VC, Shlyakhter I, Yousif A, Mabon P, Zhang X, Shen W, Cabral J, Thomas C, Enns E, Brown J, Boekel J, Hollander Md, Kelleher J, Turaga N, Ruiter JRd, Bouvier D, Gladman S, Choudhary S, Harding N, Eggenhofer F, Kratz A, Fang Z, Kleinkauf R, Timm H, Cock PJA, Seiler E, Brislawn C, Nguyen H, Stovner EB, Ewels P, Chambers M, Johnson JE, Hägglund E, Ye S, Guimera RV, Pruesse E, Dunn WA, Parsons L, Patro R, Koppstein D, Grassi E, Wohlers I, Reynolds A, Cornwell M, Stoler N, Blankenberg D, He G, Bargull M, Junge A, Farouni R, Freeberg M, Singh S, Bogema DR, Cumbo F, Wang L, Larson DE, Workentine ML, Devisetty UK, Laurent S, Roger P, Garnier X, Agren R, Khan A, Eppley JM, Li W, Stöcker BK, Rausch T, Taylor J, Wright PR, Taranto AP, Chicco D, Sennblad B, Baaijens JA, Gopez M, Abdennur N, Milne I, Preussner J, Pinello L, Srivastava A, Chande AT, Kensche PR, Pirola Y, Knudsen M, Bruijn Id, Blin K, Gonnella G, Enache OM, Rai V, Waters NR, Hiltemann S, Bendall ML, Stahl C, Miles A, Boursin Y, Perez-Riverol Y, Schmeier S, Clarke E, Arvai K, Jung M, Domenico TD, Seiler J, Rasche E, Kornobis E, Beisser D, Rahmann S, Mikheyev AS, Tran C, Capellades J, Schröder C, Salatino AE, Dirmeier S, Webster TH, Moskalenko O, Stephen G, Köster J

Bioconda: A sustainable and comprehensive software distribution for the life sciences

PrePrint
Publishers version: doi: 10.1101/207092