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Mar 2020

Iakovidis M., Soumpourou E., Anderson E., Etherington G., Yourstone S., Thomas C.

Genes Encoding Recognition of the Cladosporium fulvum Effector Protein Ecp5 Are Encoded at Several Loci in the Tomato Genome.

G3 (Bethesda, Md.)

Publishers version: doi:10.1534/g3.120.401119

Mar 2020

Sauret-Güeto S., Sauret-Güeto E., Silvestri L., Rebmann M., Tomaselli M., Markel K., Delmans M., West A., Patron N. J., Haseloff J.

Systematic tools for reprogramming plant gene expression in a simple model, Marchantia polymorpha.

ACS Synthetic Biology

Publishers version: doi:10.1021/acssynbio.9b00511

Mar 2020

Kirkup B. M., McKee A. M., Madgwick M., Price C. P., Dreger S. A., Makin K. A., Caim S., Le Gall G., Paveley J., Leclaire C., Dalby M., Alcon-Giner C., Andrusaite A., Di Modica M., Triulzi T., Tagliabue E., Milling S. W. F., Weilbaecher K. N., Korcsmáros T., Hall L. J., Robinson S. D.

Antibiotic-induced disturbances of the gut microbiota result in accelerated breast tumour growth via a mast cell-dependent pathway

https://www.biorxiv.org/content/10.1101/2020.03.07.982108v1.full

Publishers version: doi:10.1101/2020.03.07.982108

Mar 2020

DAmato A., Lucarini E., Man A. L., Branca J. J. V., Ghelardini C., Amedei A., Bertelli E., Regoli M., Pacini A., Luciani G., Gallina P., Altera A., Narbad A., Gulisano M., Hoyles L., Vauzour D., Nicoletti N.

Faecal microbiota transplant from aged donor mice affects spatial learning and memory via modulating hippocampal synaptic plasticity- and neurotransmissionrelated proteins in young recipients.

bioRkiv

Publishers version: doi:10.1101/866459

Mar 2020

Sauret-Gueto S., Frangedakis E., Silvestri, L., Rebmann M., Tomaselli M., Markel K., Delmans M., West A., Patron N. J., Haseloff J.

Systematic tools for reprogramming plant gene expression in a simple model, Marchantia polymorpha

BioRxiv

Publishers version: doi:10.1101/2020.02.29.971002

Mar 2020

Püngel D., Treveil A., Dalby M. J., Caim S., Colquhoun I. J., Booth C., Ketskemety J., Korcsmaros T., van Sinderen D., Lawson M. A., Hall L. J.

Bifidobacterium breve UCC2003 Exopolysaccharide Modulates the Early Life Microbiota by Acting as a Potential Dietary Substrate.

Nutrients

Publishers version: doi:10.3390/nu12040948

Mar 2020

Ballal A., Laurendon C., Salmon M., Vardakou M., Cheema J., Defernez M., O'Maille P. E., Morozov A. V.

Sparse epistatic patterns in the evolution of terpene synthases.

Molecular biology and evolution

Publishers version: doi:10.1093/molbev/msaa052

Feb 2020

Seyed Tabib N., Madgwick M., Sudhakar P., Verstockt B., Korcsmaros T., Vermeire S.

Big data in IBD: big progress for clinical practice.

Gut

Publishers version: doi:http://dx.doi.org/10.1136/gutjnl-2019-320065

Feb 2020

Lindqvist-Kreuze H., de Boeck B., Unger P., Gemenet D., Li X., Pan Z., Sui Q., Qin J., Woldegjorgis G., Negash K., Seid I., Hirut B., Gastelo M., De Vega J., Bonierbale M.

Global multi-environment resistance QTL for foliar late blight resistance in tetraploid potato with tropical adaptation

biorxiv

Publishers version: doi:10.1101/2020.02.16.950618

Feb 2020

Jones E. J., Booth C., Fonseca S., Parker A., Cross K., Clopes A., Hautefort I., Mayer U., Wileman T., Stentz R., Carding S.

The uptake, trafficking and biodistribution of Bacteroides thetaiotaomicron generated outer membrane vesicles

Frontiers in Microbiology, Microbial Physiology and Metabolism

Publishers version: doi:10.3389/fmicb.2020.00057

Jan 2020

Worthington M., Perez J. G., Mussurova S., Silva-Cordoba A., Castiblanco V., Jones C., Fernandez-Fuentes N., Skot L., Dyer S., Tohme J., Di Palma F., Arango J., Armstead I., De Vega J.

A new genome allows the identification of genes associated with natural variation in aluminium tolerance in Brachiaria grasses

bioRxiv

Publishers version: doi:10.1101/843870

Jan 2020

Haldenby S,Bronowski C,Nelson C,Kenny J,Martinez-Rodriguez C,Chaudhuri R,Williams NJ,Forbes K,Strachan NJ,Pulman J,Winstanley IN,Corless CE,Humphrey TJ,Bolton FJ,O'Brien SJ,Hall N,Hertz-Fowler C,Winstanley C

Increasing prevalence of a fluoroquinolone resistance mutation amongst Campylobacter jejuni isolates from four human infectious intestinal disease studies in the United Kingdom.

Publishers version: doi:10.1371/journal.pone.0227535

Dec 2019

De Vega J., Davey R. P., Duitama J., Escobar D., Cristancho‐Ardila M. A., Etherington G. J., Minotto A., Arenas‐Suarez N. E., Pineda‐Cardenas J. D., Correa‐Alvarez J., Camargo Rodriguez A. V., Haerty W., Mallarino-Robayo J. P., Barreto-Hernandez E., Muñoz-Torres M., Fernandez-Fuentes N., Di Palma F.

Colombia's cyberinfrastructure for biodiversity: Building data infrastructure in emerging countries to foster socioeconomic growth

Plant People Planet

Publishers version: doi:10.1002/ppp3.10086

Dec 2019

Leggett R. M., Alcon-Giner C., Heavens D., Caim S., Brook T. C., Kujawska M., Martin S., Peel N., Acford-Palmer H., Hoyles L., Clarke P., Hall L. J., Clark M. D.

Rapid MinION profiling of preterm microbiota and antimicrobial-resistant pathogens.

Nature microbiology

Publishers version: doi:10.1038/s41564-019-0626-z

Dec 2019

Etherington G., Soranzo N., Mohammed S., Haerty W., Davey R. P., Palma F. D.

A Galaxy-based training resource for single-cell RNA-sequencing quality control and analyses.

GigaScience

Publishers version: doi:10.1093/gigascience/giz144