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Jul 2020

Colmer J,O CM,Wells R,Bostrom A,Reynolds D,Websdale D,Shiralagi G,Lu W,Lou Q,Le Cornu,Ball J,Renema J,Flores Andaluz,Benjamins R,Penfield S,Zhou J

SeedGerm: a cost-effective phenotyping platform for automated seed imaging and machine-learning based phenotypic analysis of crop seed germination.

The New phytologist

Publishers version: doi:10.1111/nph.16736

Jul 2020

Khumsupan P,Kozlowska MA,Orr JA,Andreou AI,Nakayama N,Patron NJ,Carmo-Silva E,McCormick AJ

Generating and characterising single- and multi-gene mutants of the Rubisco small subunit family in Arabidopsis

Journal of Experimental Botany

Publishers version: doi:10.1093/jxb/eraa316

Jul 2020

Demeter A,Romero-Mulero MC,Csabai L,Ölbei M,Sudhakar P,Haerty W,Korcsmáros T

ULK1 and ULK2 are less redundant than previously thought: computational analysis uncovers distinct regulation and functions of these autophagy induction proteins.

Scientific reports

Publishers version: doi:10.1038/s41598-020-67780-2

Jul 2020

Sarkar A,Moreau C,Cheema J,Edwards A,Emmrich PMF,Steuernagel B,Kaithakottil GG,Swarbreck D,Clarke J,Wang TL,Domoney C,Martin C

Can we identify agronomically useful and climate-smart characteristics for legumes by comparing grass pea with pea?

Legume Perspectives

Publishers version: doi:n/a

Jul 2020

Seear PJ,France MG,Gregory CL,Heavens D,Schmickl R,Yant L,Higgins JD

A novel allele of ASY3 is associated with greater meiotic stability in autotetraploid Arabidopsis lyrata.

PLoS genetics

Publishers version: doi:10.1371/journal.pgen.1008900

Jul 2020

Higgins J,Bruno Santos,Tran Dang,Khuat Huu,Tran Duy,Nguyen Thi,Nguyen Truong,Dang Thi,Nguyen Thuy,Kieu Thi,Cong Nguyen,Tran Thi,Nguyen Thanh,Hoang Dung,Nguyen Thanh,Hoang Thi,Ta Kim,Cuong Duy,Son Vi,La Tuan,Nguyen Van,Tran Dang,Anthony Hall,Sarah Dyer,Le Huy,Mario Caccamo,Jose De

Evidence of selection, adaptation and untapped diversity in Vietnamese rice landraces

https://www.biorxiv.org/content/10.1101/2020.07.07.191981v1

Publishers version: doi:10.1101/2020.07.07.191981

Jul 2020

Baggs EL,Monroe JG,Thanki AS,O R,Schudoma C,Haerty W,Krasileva KV

Convergent Loss of an EDS1/PAD4 Signaling Pathway in Several Plant Lineages Reveals Coevolved Components of Plant Immunity and Drought Response.

The Plant cell

Publishers version: doi:10.1105/tpc.19.00903

Jul 2020

Baggs EL,Monroe JG,Thanki AS,O R,Schudoma C,Haerty W,Krasileva KV

Convergent Loss of an EDS1/PAD4 Signaling Pathway in Several Plant Lineages Reveals Coevolved Components of Plant Immunity and Drought Response.

The Plant cell

Publishers version: doi:10.1105/tpc.19.00903

Jul 2020

Parkinson J,Mitreva M,Whitton C,Thomson M,Daub J,Martin J,Schmid R,Hall N,Barrell B,Waterston RH,McCarter JP,Blaxter ML

Author Correction: A transcriptomic analysis of the phylum Nematoda.

Nature genetics

Publishers version: doi:10.1038/s41588-020-0658-6

Jul 2020

Frioux C. F., Singh D. S., Korcsmaros T. K., Hildebrand F. H.

From bag-of-genes to bag-of-genomes: metabolic modelling of communities in the era of metagenome-assembled genomes

Computational and Structural Biotechnology Journal

Publishers version: doi:NA

Jun 2020

Bovo S,Di Palma F,Etherington G,Fontanesi L

Whole-genome sequencing of European autochthonous and commercial pig breeds allows the detection of signatures of selection for adaptation of genetic resources to different breeding and production systems

Genetics Selection Evolution

Publishers version: doi:10.1186/s12711-020-00553-7

Jun 2020

Penso-Dolfin L,Man A,Mehta TK,Haerty W,Di Palma F

Analysis of structural variants in four African cichlids highlights an association with developmental and immune related genes

BMC Evolutionary Biology

Publishers version: doi:10.1186/s12862-020-01629-0

Jun 2020

Duncan A,Barry K,Daum C,Eloe-Fadrosh E,Roux S,Tringe S,Schmidt K,Valentin K,Varghese N,Grigoriev I,Leggett R,Moulton V,Mock T

Metagenome-assembled genomes of phytoplanktoncommunities across the Arctic Circle

bioRxiv

Publishers version: doi:10.1101/2020.06.16.154583

Jun 2020

Villegas D,Arevalo A,Nuñez J,Mazabel J,Subbarao G,Rao I,De Vega J,Arango J

Biological Nitrification Inhibition (BNI): Phenotyping of a Core Germplasm Collection of the Tropical Forage Grass Megathyrsus maximus Under Greenhouse Conditions.

Frontiers in plant science

Publishers version: doi:10.3389/fpls.2020.00820

Jun 2020

Reddington K,Eccles D,O J,Drown DM,Hansen LH,Nielsen TK,Ducluzeau A,Leggett R,Heavens D,Peel N,Snutch TP,Bayega A,Oikonomopoulos S,Ragoussis I,Barry T,van der Helm E,Jolic D,Richardson H,Jansen H,Tyson JR,Jain M,Brown BL

Metagenomic analysis of planktonic riverine microbial consortia using nanopore sequencing reveals insight into river microbe taxonomy and function

GigaScience

Publishers version: doi:10.1093/gigascience/giaa053