Publications

Subscribe.

Get the latest science, news, events, training courses and vacancies by email.

Mar 2020
Kiu R, Treveil A, Harnisch LC, Caim S, Leclaire C, van Sinderen D, Korcsmaros T, Hall LJ

Bifidobacterium breveUCC2003 induces a distinct global transcriptomic programme in neonatal murine intestinal epithelial cells

PrePrint
Publishers version: doi: 10.1101/2020.03.27.011692
access level
Mar 2020
Mathers TC, Wouters RHM, Mugford ST, Swarbreck D, Van Oosterhout C, Hogenhout SA

Chromosome-scale genome assemblies of aphids reveal extensively rearranged autosomes and long-term conservation of the X chromosome

PrePrint
Publishers version: doi: 10.1101/2020.03.24.006411
access level
Mar 2020
J Etherington G, Heavens D, Baker D, Lister A, McNelly R, Garcia G, Clavijo B, Macaulay I, Haerty W, Di Palma F

Bionano genome mapping from animal tissue v1

PrePrint
Publishers version: doi: 10.17504/protocols.io.bd7ei9je
access level
Mar 2020
J Etherington G, Heavens D, Baker D, Lister A, McNelly R, Garcia G, Clavijo B, Macaulay I, Haerty W, Di Palma F

Long Mate Pair Library Construction Protocol v1

PrePrint
Publishers version: doi: 10.17504/protocols.io.bd3ui8nw
access level
Mar 2020
J Etherington G, Heavens D, Baker D, Lister A, McNelly R, Garcia G, Clavijo B, Macaulay I, Haerty W, Di Palma F

10x Genomics Library Construction v1

PrePrint
Publishers version: doi: 10.17504/protocols.io.bd3vi8n6
access level
Mar 2020
J Etherington G, Heavens D, Baker D, Lister A, McNelly R, Garcia G, Clavijo B, Macaulay I, Haerty W, Di Palma F

Protocols for "Sequencing smart: De novo sequencing and assembly approaches for a non-model mammal" v1

PrePrint
Publishers version: doi: 10.17504/protocols.io.bd3ri8m6
access level
Mar 2020
J Etherington G, Heavens D, Baker D, Lister A, McNelly R, Garcia G, Clavijo B, Macaulay I, Haerty W, Di Palma F

Amplification Free Paired End Library Construction Protocol v1

PrePrint
Publishers version: doi: 10.17504/protocols.io.bd3ti8nn
Mar 2020
Steuernagel B, Witek K, Krattinger SG, Ramirez-Gonzalez RH, Schoonbeek H, Yu G, Baggs E, Witek AI, Yadav I, Krasileva KV, Jones JD, Uauy C, Keller B, Ridout CJ, Wulff BB

The NLR-Annotator Tool Enables Annotation of the Intracellular Immune Receptor Repertoire

Journal Article
Publishers version: doi: 10.1104/pp.19.01273
access level
Mar 2020
Alneberg J, Bennke C, Beier S, Bunse C, Quince C, Ininbergs K, Riemann L, Ekman M, Jürgens K, Labrenz M, Pinhassi J, Andersson AF

Ecosystem-wide metagenomic binning enables prediction of ecological niches from genomes

Journal Article
Publishers version: doi: 10.1038/s42003-020-0856-x
access level
Mar 2020
Sauret-Güeto S, Frangedakis E, Silvestri L, Rebmann M, Tomaselli M, Markel K, Delmans M, West A, Patron NJ, Haseloff J

Systematic Tools for Reprogramming Plant Gene Expression in a Simple Model, Marchantia polymorpha

Journal Article
Publishers version: doi: 10.1021/acssynbio.9b00511
access level
Mar 2020
Dolfin LP, Haerty W, Hindle A, Palma FD

microRNA profiling in the Weddell Seal suggests novel regulatory mechanisms contributing to diving adaptation

PrePrint
Publishers version: doi: 10.21203/rs.3.rs-15753/v2
Mar 2020
Kirkup BM, McKee AM, Madgwick M, Price CA, Dreger SA, Makin KA, Caim S, Gall GL, Paveley J, Leclaire C, Dalby M, Alcon-Giner C, Andrusaite A, Modica MD, Triulzi T, Tagliabue E, Milling SW, Weilbaecher KN, Korcsmáros T, Hall LJ, Robinson SD

Antibiotic-induced disturbances of the gut microbiota result in accelerated breast tumour growth via a mast cell-dependent pathway

PrePrint
Publishers version: doi: 10.1101/2020.03.07.982108
access level
Mar 2020
Dolfin LP, Haerty W, Hindle A, Palma FD

microRNA profiling in the Weddell Seal suggests novel regulatory mechanisms contributing to diving adaptation

PrePrint
Publishers version: doi: 10.21203/rs.3.rs-15753/v1
access level
Feb 2020
Sauret-Güeto S, Frangedakis E, Silvestri L, Rebmann M, Tomaselli M, Markel K, Delmans M, West A, Patron NJ, Haseloff J

Systematic tools for reprogramming plant gene expression in a simple model,Marchantia polymorpha

PrePrint
Publishers version: doi: 10.1101/2020.02.29.971002
access level
Feb 2020
Seyed Tabib NS, Madgwick M, Sudhakar P, Verstockt B, Korcsmaros T, Vermeire S

Big data in IBD: big progress for clinical practice

Journal Article
Publishers version: doi: 10.1136/gutjnl-2019-320065