Publications.

Apr 2020

Schreiber M., Mascher M., Wright J., Padmarasu S., Himmelbach A., Heavens D., Milne L., Clavijo B. J., Stein N., Waugh R.

A Genome Assembly of the Barley 'Transformation Reference' Cultivar Golden Promise.

G3 (Bethesda, Md.)

Publishers version: doi:10.1534/g3.119.401010

Apr 2020

Thanki A., Davey R., Haerty W.

Development of computational techniques for genomic data analysis and visualisation in model and non-model organisms

Publishers version: doi:

Apr 2020

Nyangiri OA,Noyes H,Mulindwa J,Ilboudo H,Kabore JW,Ahouty B,Koffi M,Asina OF,Mumba D,Ofon E,Simo G,Kimuda MP,Enyaru J,Alibu VP,Kamoto K,Chisi J,Simuunza M,Camara M,Sidibe I,MacLeod A,Bucheton B,Hall N,Hertz-Fowler C,Matovu E

Copy number variation in human genomes from three major ethno-linguistic groups in Africa.

BMC genomics

Publishers version: doi:10.1186/s12864-020-6669-y

Apr 2020

Bahram M., Netherway T., Hildebrand F., Pritsch K., Drenkhan R., Loit K., Anslan S., Bork P., Tedersoo L.

Plant nutrient-acquisition strategies drive topsoil microbiome structure and function.

New Phytologist

Publishers version: doi:10.1111/nph.16598

Apr 2020

Penso-Dolfin L,Haerty W,Hindle A,Di Palma F

microRNA profiling in the Weddell seal suggests novel regulatory mechanisms contributing to diving adaptation.

BMC genomics

Publishers version: doi:10.1186/s12864-020-6675-0

Mar 2020

Mathers T. C., Wouters R. H. M., Mugford S. T., Swarbreck D., van Oosterhout C., Hogenhout S. A.

Chromosome-scale genome assemblies of aphids reveal extensively rearranged autosomes and long-term conservation of the X chromosome

biorxiv.org

Publishers version: doi:10.1101/2020.03.24.006411

Mar 2020

Iakovidis M., Soumpourou E., Anderson E., Etherington G., Yourstone S., Thomas C.

Genes Encoding Recognition of the Cladosporium fulvum Effector Protein Ecp5 Are Encoded at Several Loci in the Tomato Genome.

G3 (Bethesda, Md.)

Publishers version: doi:10.1534/g3.120.401119

Mar 2020

Sauret-Güeto S., Sauret-Güeto E., Silvestri L., Rebmann M., Tomaselli M., Markel K., Delmans M., West A., Patron N. J., Haseloff J.

Systematic tools for reprogramming plant gene expression in a simple model, Marchantia polymorpha.

ACS Synthetic Biology

Publishers version: doi:10.1021/acssynbio.9b00511

Mar 2020

Kirkup BM,McKee AM,Madgwick M,Price CP,Dreger SA,Makin KA,Caim S,Le Gall G,Paveley J,Leclaire C,Dalby M,Alcon-Giner C,Andrusaite A,Di Modica M,Triulzi T,Tagliabue E,Milling SWF,Weilbaecher KN,Korcsmáros T,Hall LJ,Robinson SD

Antibiotic-induced disturbances of the gut microbiota result in accelerated breast tumour growth via a mast cell-dependent pathway

https://www.biorxiv.org/content/10.1101/2020.03.07.982108v1.full

Publishers version: doi:10.1101/2020.03.07.982108

Mar 2020

DAmato A., Lucarini E., Man A. L., Branca J. J. V., Ghelardini C., Amedei A., Bertelli E., Regoli M., Pacini A., Luciani G., Gallina P., Altera A., Narbad A., Gulisano M., Hoyles L., Vauzour D., Nicoletti N.

Faecal microbiota transplant from aged donor mice affects spatial learning and memory via modulating hippocampal synaptic plasticity- and neurotransmissionrelated proteins in young recipients.

bioRkiv

Publishers version: doi:10.1101/866459

Mar 2020

Sauret-Gueto S., Frangedakis E., Silvestri, L., Rebmann M., Tomaselli M., Markel K., Delmans M., West A., Patron N. J., Haseloff J.

Systematic tools for reprogramming plant gene expression in a simple model, Marchantia polymorpha

BioRxiv

Publishers version: doi:10.1101/2020.02.29.971002

Mar 2020

Püngel D., Treveil A., Dalby M. J., Caim S., Colquhoun I. J., Booth C., Ketskemety J., Korcsmaros T., van Sinderen D., Lawson M. A., Hall L. J.

Bifidobacterium breve UCC2003 Exopolysaccharide Modulates the Early Life Microbiota by Acting as a Potential Dietary Substrate.

Nutrients

Publishers version: doi:10.3390/nu12040948

Mar 2020

Ballal A., Laurendon C., Salmon M., Vardakou M., Cheema J., Defernez M., O'Maille P. E., Morozov A. V.

Sparse epistatic patterns in the evolution of terpene synthases.

Molecular biology and evolution

Publishers version: doi:10.1093/molbev/msaa052

Feb 2020

Seyed Tabib N., Madgwick M., Sudhakar P., Verstockt B., Korcsmaros T., Vermeire S.

Big data in IBD: big progress for clinical practice.

Gut

Publishers version: doi:http://dx.doi.org/10.1136/gutjnl-2019-320065

Feb 2020

Lindqvist-Kreuze H., de Boeck B., Unger P., Gemenet D., Li X., Pan Z., Sui Q., Qin J., Woldegjorgis G., Negash K., Seid I., Hirut B., Gastelo M., De Vega J., Bonierbale M.

Global multi-environment resistance QTL for foliar late blight resistance in tetraploid potato with tropical adaptation

biorxiv

Publishers version: doi:10.1101/2020.02.16.950618