Research

Single-cell analysis in forensic science: the SCAnDi project

Single-cell and single molecule analysis for DNA identification

Project Summary.

Funded by: 

UKRI Economic and Social Research Council

Project co-investigators:

Dr Iain Macaulay (project lead)
Single-cell isolation and profiling

Prof Lorna Dawson, James Hutton Institute
Environmental forensic science and criminal justice cases

Dr Katherine Brown, University of Portsmouth
Low-yield DNA, NGS and Entomology

Dr George Zouganelis, University of Derby
Short-tandem repeat applications

Dr Nick Dawnay, Liverpool John Moores University
Forensic genetics and non-human DNA

Prof Ardhendu Behera, Edge Hill University
Computer vision and AI techniques

Dr Michael Chen, University of Edinburgh
Microfluidics

DNA analysis has revolutionised forensic science by enabling the identification of individuals from the trace amounts of DNA transferred at a crime scene. 

An individual’s DNA can be transferred either within an intact cell - such as a blood cell, a skin cell or a sperm cell - or as free DNA.

We shed cells and DNA wherever we go, often in a context-specific manner: different types of contact will result in the transfer and mixture of different cell types.

While DNA analysis is widely applied in a forensic setting, identifying individuals becomes much more difficult when material from multiple individuals is mixed. 

Around 45 per cent of forensic samples within the UK criminal justice system are believed to contain human DNA from two or more individuals. 

If there is DNA from more than one person present in a sample, traditional techniques may not be able to separate the identities of all the contributing individuals and reduce the success of searches against DNA databases.  

The SCAnDi Project

Single-cell genomic technologies have advanced rapidly in the last decade, with an array of approaches for the analysis of genetic material from individual cells, but these technologies have had limited exploration in a forensic setting.

These approaches could allow DNA profiles to be constructed from cells found at the scene of a crime. These profiles could also be linked with images of the cell, which could provide valuable contextual information to forensic experts - particularly where there are mixed samples.

Funded by the UKRI Economic and Social Research Council, the project - ‘Single-cell and single molecule analysis for DNA identification (SCAnDi)' - brings together multidisciplinary expertise, including single-cell genomics, DNA profiling, microfluidics, artificial intelligence, forensic genetics with practitioners in the justice system to deliver proof-of-principle research to demonstrate the applicability of single-cell analysis in forensic science. 

 

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Close up on the eyepiece of the Leica microscope with a blurred out background

Impact statement.

Our focus on stakeholder engagement from initial scope ensures practical relevance is a central component of the research activities. 

We are establishing a network of forensic practitioners, commercial suppliers, researchers, and investigative and legal representatives to ensure the technical deliveries remain aligned with the needs of end-users in the justice system.

Single-cell infrastructure

The Earlham Institute hosts the BBSRC National Bioscience Research Infrastructure in Transformative Genomics, bringing together specialist facilities, equipment, and expertise in genome science.

Our platforms for cell sorting, automation, and genomics are world-class and provide SCAnDi with an exceptional environment in which to develop and test these approaches.

Event Science

Earlham Institute Student Symposium 2024

Providing an opportunity for colleagues across the Norwich Research Park to engage with peers, and find out about the research that happens from PhD Students at the Earlham Institute.

Start date: 28 November 2024
End date: 28 November 2024
Time: 09.30 - 17.00
Venue: Earlham Institute (Norwich UK)
Enquiries:

esb@earlham.ac.uk

 

 

Registration deadline: 28 November 2024
Cost: Free

About the event

The symposium will feature a dynamic schedule of events to engage and inspire. We will hear from Professor Gideon Henderson, Chief Scientific Adviser from Defra, who will share his unique insights in the morning session. 

The day will kick off with registration and a welcome talk, with presentations from 3rd and 4th-year students throughout the day. There will be flash poster talks from 2nd-year students and a poster session and scavenger hunt. Breaks for coffee, lunch, and networking will provide plenty of opportunities to connect with students and colleagues across EI and the NRP.

Please note: This symposium is only open to students and scientists at one of the Norwich Bioscience Institutes (NBI), including the Earlham Institute (EI), the John Innes Centre (JIC), the Sainsbury Laboratory (TSL) and the Quadram Institute (QIB).

 

About the EI Student Body

The Student Body represents and supports to PhD Student community at the Earlham Institute. The representatives meet regularly with the NBI Graduate Schools Executive and EI PGR Director Dr Conrad Nieduszynski, for formal and informal conversations regarding student well-being and any possible concerns.

We also invite other teams and representatives from across the Earlham Institute to student meetings, to discuss and share information and opportunities available to students.

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Staff and students networking at EI during a conference poster session

Register today.

Registration deadline: 28 November 2024

Participation: Open to all

Research

Tulay Ugurlu

PhD Student
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Profile of Tulay Ugurlu

Biography

Contact details:

tulay.ugurlu@earlham.ac.uk

 

Tulay is a PhD student in the Quince Group.

Research

Jhih-Sheng Liu

PhD Student
Image
Profile of Jhih-sheng Liu

Biography

Contact details:

jhih-sheng.liu@earlham.ac.uk

 

I am a Norwich Research Park Bioscience Doctoral Training Partnership (NRPDTP) CASE PhD student in Jose de Vega’s group. 

My research focuses on uncovering the genomic basis of cold tolerance in white clover in order to improve current cultivars. In collaboration with the breeding company Germinal, we aim to enhance white clover’s potential as a nitrogen-rich crop for temperate regions, therefore reducing the need for chemical inputs in agriculture.

Before joining the Earlham Institute, I completed a master’s degree in Landscape Ecology at the University of Hohenheim, Germany, where I studied the role of genomic structural variants in the rapid speciation of bee orchids. 

I also hold a bachelor’s degree in Life Science from National Taiwan University, where I explored population dynamics of fishes to inform sustainable fisheries management.

Low-protein diets offer protective effect during bacterial infection

20 November 2024

Reducing the amount of protein in your diet might benefit your immune system during an infection, according to a new study in human cells and mice.

Notes to editors.

Exploring how RNA splicing influences the transcriptional landscape of wheat

Vacancy details:

Start date: 01 October 2025
Application deadline: 25 November 2024
Apply

Are you interested in a career in bioinformatics, genomics, or machine learning? Do you want to contribute to cutting-edge research in plant science?  

The Earlham Institute’s vibrant, interdisciplinary research team values diverse perspectives and collaboration and is working to unravel the complexities of RNA splicing in wheat.

Cellular response to DNA replication stress

Vacancy details:

Start date: 01 October 2025
Application deadline: 25 November 2024
Apply

Complete, accurate genome replication is essential for all life on earth. However, the machines that replicate the DNA must overcome many obstacles, including transcription and DNA damage, collectively termed ‘replication stress’.