Event Science

Norwich Single-Cell and Spatial Symposium

Now in its eighth year, and extended to a two-day event, the Norwich Single-Cell and Spatial Symposium at Earlham Institute covers single-cell and spatial genomics technologies and their application in microbial, plant, animal and human health and disease.

Start date: 18 June 2025
End date: 19 June 2025
Time: 09.00 - 16.30
Venue: Earlham Institute (Norwich UK)
Organiser: Emily Angiolini
Enquiries:

training@earlham.ac.uk

Cost: £175.00

About the event

Single-cell and spatial technologies continue to develop at pace, generating new insights into cellular diversity within living systems. 

This event aims to bring together researchers who are curious about applying single-cell technologies with those who are experts working at the forefront of the field and across a wide range of species. 

Held in partnership with the UEA School of Biological Sciences, the symposium covers single-cell and spatial technologies, and their applications in microbial, plant, animal and human health and disease. 

Offering a forum for researchers working on similar challenges in diverse systems to discuss the latest developments in single-cell genomics, while networking with other researchers with the intention of catalysing future development and application of single-cell genomics across the UK. 

The event will feature talks from keynotes, invited speakers and selected abstracts, and we are keen to capture as broad a range of single-cell applications as possible.

Abstracts

Download the 2025 Speaker Abstract Booklet

 

Sponsors and Supporters

The Norwich Single-Cell and Spatial Symposium is held in partnership with the University of East Anglia and with support from our sponsors.

Image
Logos of sponsors the Norwich Single Cell symposium including UEA, BioLegend, illumina, Vizgen, Singleron, Pixelgen Technologies, Parse Biosciences, BD Biosciences, 10x Genomics and Proteintech

 

 

 

 

 

Register today.

Participation: Open to all

Register your interest in attending Norwich Single-Cell and Spatial Symposium today.

Research

Meha Patel

Clinical Research Fellow
Image
Profile of Meha Patel

Biography

Contact details:

  • +44 (0)1603 450 871

meha.patel@earlham.ac.uk

 


 

I am a Wellcome Trust Clinical PhD Fellow in the Macaulay group. My PhD is focused on using single cell technologies to define the tissue-resident and circulating immune cell landscape in Primary Sclerosing Cholangitis, a rare liver disease.

I graduated from the University of Birmingham Medical School in 2015, having undertaken an intercalated Biomedical Science degree from 2012-2013 with Dr Mark Webber, looking at antibiotic resistance mechanisms in GyrA mutants of Salmonella enterica serovar Typhimurium.

I moved to Oxford to start my academic clinical training, during which I contributed to a project looking into using health informatics data to describe clearance dynamics in chronic hepatitis B infection with Professor Katie Jeffery, Professor Ellie Barnes and Dr Philippa Matthews.

Prior to starting my PhD, I completed an Academic Clinical Fellowship and I am currently a Specialty Registrar in Gastroenterology and Hepatology in the East of England.

Article Science

Boosting beans for breeders

27 September 2024
Research

Sam Speak

Postdoctoral Research Scientist
Image
Profile of Sam Speak

Biography

Personal pronouns: He/him

Contact details:

  • +44 (0) 1603 450 778 

sam.speak@earlham.ac.uk

ORCiD

I am a Postdoctoral Research Scientist in the Haerty Group, working on the Tilapia Genomic Resources project. As part of this project, I will be using bioinformatic and transcriptomic techniques including bulk and single-cell RNA-Seq. My work aims to identify loci associated with aquaculture relevant traits related to environmental stress, including temperature, salinity and pathogen resistance within Tilapia species.

Prior to this position, I was a NERC ARIES DTP PhD student at the University of East Anglia, the Natural History Museum London and Chester Zoo working on the conservation genomics of endangered bird species in zoos. 

This project focused on quantifying the genetic load of individuals in captive breeding programs using CADD scores within the ultraconserved elements of the genome. These methods were applied to species that had been through intense population bottlenecks including the pink pigeon (Nesoenas mayeri) and the whooping crane (Grus americana). These approaches were designed to inform optimal mate pairings for captive breeding and reintroduction programs, to avoid inbreeding depression.

In 2019 I completed my BSc Hons in Biological Sciences at the UEA and in 2020 my MScR where I applied bioinformatic analyses to detect signature of genetic drift and adaptive evolution in diatoms at the UEA.

Pan-European project generates genomes showcasing continent's rich biodiversity

16 September 2024

The European Reference Genome Atlas (ERGA) has today announced the success of its Pilot Project, bringing together collaborators from 33 European countries to produce high-quality reference genomes for 98 species.

Notes to editors.

Research

Ellen Cameron

Postdoctoral Research Scientist
Image
Profile of Ellen Cameron

Biography

Contact details:

ellen.cameron@earlham.ac.uk

ORCiD

 

Ellen is an ecologist interested in applying modern molecular techniques to characterise ecological community structures and species interactions. 

Currently, she is exploring the potential of using single-cell RNA sequencing to characterise multi-species assemblages found in symbiotic associations. In the Papatheodorou group, she will contribute to the development of single-cell RNAseq analysis pipelines for non-model organisms.

Prior to joining the Earlham Institute, Ellen was a postdoctoral fellow at the Wellcome Sanger Institute and the European Bioinformatics Institute using long-read metagenomics to characterise lichens and explore the evolution of algal and fungal symbionts.

Ellen completed a master's degree in molecular science at the Toronto Metropolitan University and a PhD in biology at the University of Waterloo in Ontario, Canada where her research focused on microalgae and cyanobacteria.

Event Science

Dame Janet Thornton Annual Lecture

The Dame Janet Thornton Annual Lecture recognises Janet’s distinguished career, and her significant contribution to broadening the scope of traditional bioscience through applying computational methods to analyse biological data.

Start date: 25 November 2024
End date: 25 November 2024
Time: 13.30 - 15.30
Venue: John Innes Conference Centre
Organiser: Chloe Warren
Registration deadline: 11 November 2024
Cost: Free

About the event

We’re pleased to be welcoming Elinor Karlsson to the Earlham Institute for the inaugural Dame Janet Thornton Lecture. 

The Zoonomia Project: Exploring 100 Million Years of Evolution for Health and Conservation

Imagine a treasure trove of genomic secrets from more than 240 mammalian species spanning over 100 million years of evolutionary history. The Zoonomia Project, one of the largest comparative genomics resources produced to date, is exactly that.

By capturing mammalian genetic diversity, the Zoonomia Project found that about 11% of the human genome is evolving unusually slowly, and this can help us find the genetic changes responsible for human diseases. Zoonomia’s massive data compilation also allowed us to reconstruct the phenotype of Balto, a sled dog that helped save an Alaskan town from a 1925 diphtheria outbreak.

We’re now combining this genomic treasure trove with cellular models to explore how important traits, like hibernation and brain size, evolved across species. We look towards an even more data-rich future, and ask how we can ensure that large projects like Zoonomia, motivated by the opportunity to address health challenges in humans, can help us understand and protect our planet’s biodiversity.

Dame Janet Thornton

Professor Dame Janet Thornton is a leading figure in structural bioinformatics. She was the Director of EMBL’s European Bioinformatics Institute (EMBL-EBI) between 2001 and 2015, and Chair of the Earlham Institute’s Board of Trustees from 2017 until 2022. 

The Dame Janet Thornton Annual Lecture recognises Prof Thornton’s distinguished career, and her significant contribution to broadening the scope of traditional bioscience through applying computational methods to analyse biological data.

Elinor Karlsson

Elinor Karlsson, PhD is a Professor in Genomics and Computational Biology at the UMass Chan Medical School, and director of Vertebrate Genomics at the Broad Institute of MIT and Harvard. Her research combines genomics, new technology and community science to investigate diseases and discover the origins of exceptional mammalian trails like hibernation and exceptional longevity. 

Prof. Karlsson’s research includes the Zoonomia project, an international effort to compare the genomes of over 240 mammals (from the African Yellow-spotted Rock Hyrax to the Woodland Dormouse) and identify segments of DNA that are important for survival and health. Prof. Karlsson also has a special interest in pet genetics. 

Her community science nonprofit organisation, Darwin’s Ark, invites all dog and cat owners to enroll their pets in an open data research project exploring the genetic basis of behavior, as well as diseases such as cancer.

Elinor received her B.A. in biochemistry/cell biology and her B.F.A. (Bachelor of Fine Arts) from Rice University, and earned her Ph.D. in bioinformatics from Boston University. She was a postdoctoral fellow at Harvard University before starting her research group at UMass Chan Medical School in 2014, where she is the Dr. Eileen L. Berman and Stanley I. Berman Foundation Chair in Biomedical Research.

Register today.

Registration deadline: 11 November 2024

Participation: Open to all

Research

Jamie Pike

KTP Associate
Image
Profile of Jamie Pike

Biography

Personal pronouns: He/him

Contact details:

jamie.pike@earlham.ac.uk

ORCiD

 


 

As a Knowledge Transfer Partnership Associate, I act as a bridge between academia and business. I am part of the De Vega group at the Earlham Institute, but I am based at the Tozer Seeds Innovation Centre, in Cobham, Surrey. 

Embedded within Tozer’s Research and Development team, I apply genomic analysis alongside laboratory and field-based variety trials to accelerate and optimise the breeding process for celery and other vegetable crops.

My background includes a PhD funded by Waitrose-CTP at the University of Warwick, where I researched Fusarium wilt in fruit and vegetable crops. 

My work focused on pathogen diversity, identifying virulence genes, and developing approaches for disease diagnostics. I also hold a BSc in Horticulture – Plant Science from the Eden Project in Cornwall.